BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C05SP1|AL428871
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1640 1392 0.0
>3x_Contig1640
Length = 15521
Score = 1392 bits (702), Expect = 0.0
Identities = 702/702 (100%)
Strand = Plus / Minus
Query: 117 atattaaataataatggcggatggaggtacaaaaggtattgttttgaagtaccatcataa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15521 atattaaataataatggcggatggaggtacaaaaggtattgttttgaagtaccatcataa 15462
Query: 177 ttttgtaaattgtcgaaaacttttgagaatagtcttcatcaaacgaagagtacttttttg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15461 ttttgtaaattgtcgaaaacttttgagaatagtcttcatcaaacgaagagtacttttttg 15402
Query: 237 tcagtctactgggattttgaaatcaaacaaaaaaagcgtctccttaaacaccagcttcga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15401 tcagtctactgggattttgaaatcaaacaaaaaaagcgtctccttaaacaccagcttcga 15342
Query: 297 agtccttttgagccatgaaaatggataaatcaaccactcttgaagagtaaccatattcat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15341 agtccttttgagccatgaaaatggataaatcaaccactcttgaagagtaaccatattcat 15282
Query: 357 tatcataccaagaaaggaccttgaaaaaatggtcgttcaattcaataccggccttggcat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15281 tatcataccaagaaaggaccttgaaaaaatggtcgttcaattcaataccggccttggcat 15222
Query: 417 caacaatagatgaacgtgaatcggatgtgaagtcagaggacacaacggcgtctttggtaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15221 caacaatagatgaacgtgaatcggatgtgaagtcagaggacacaacggcgtctttggtaa 15162
Query: 477 cacccaaaacacccttcatatcgctgcgagatctttgttctagggccttcataatgtcat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15161 cacccaaaacacccttcatatcgctgcgagatctttgttctagggccttcataatgtcat 15102
Query: 537 cgtaagaagttttctttgctgtacggaatgtcaagtcaaccagggaaatattaattgttg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15101 cgtaagaagttttctttgctgtacggaatgtcaagtcaaccagggaaatattaattgttg 15042
Query: 597 ggactcttatagacataccggtgatcttaccattaagttcaggcaagattttccctacag 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15041 ggactcttatagacataccggtgatcttaccattaagttcaggcaagattttccctacag 14982
Query: 657 ccttagctgcaccagtagatgaaggaatgatatttccctggcaagatctaccgcctctcc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14981 ccttagctgcaccagtagatgaaggaatgatatttccctggcaagatctaccgcctctcc 14922
Query: 717 agtccttaccaccagaactggtaccatcgacagtcttttgagaagcagtagttgcatgaa 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14921 agtccttaccaccagaactggtaccatcgacagtcttttgagaagcagtagttgcatgaa 14862
Query: 777 tagttgtcatcaaggcttcttcgataccgaactcatcgtcca 818
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14861 tagttgtcatcaaggcttcttcgataccgaactcatcgtcca 14820
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6998
Number of Sequences: 1807
Number of extensions: 6998
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)